Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Gm40848-201ENSMUST00000221998 324 ntBASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Gm5874-201ENSMUST00000096101 508 ntBASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Smcr8Q3UMB5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Smcr8Q3UMB5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smcr8Q3UMB5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smcr8Q3UMB5 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.39■■□□□ 1.02
Smcr8Q3UMB5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smcr8Q3UMB5 Gm43060-201ENSMUST00000200621 289 ntBASIC21.39■■□□□ 1.01
Smcr8Q3UMB5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smcr8Q3UMB5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
Smcr8Q3UMB5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smcr8Q3UMB5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smcr8Q3UMB5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smcr8Q3UMB5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Smad6-203ENSMUST00000179458 273 ntBASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smcr8Q3UMB5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.33■■□□□ 1.01
Smcr8Q3UMB5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smcr8Q3UMB5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smcr8Q3UMB5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smcr8Q3UMB5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.33■■□□□ 1
Smcr8Q3UMB5 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Mir6236-201ENSMUST00000184437 123 ntBASIC21.32■■□□□ 1
Smcr8Q3UMB5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Smcr8Q3UMB5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.31■■□□□ 1
Smcr8Q3UMB5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smcr8Q3UMB5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Smcr8Q3UMB5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms