Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Tnrc6aQ3UHK8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnrc6aQ3UHK8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnrc6aQ3UHK8 Gm27801-201ENSMUST00000184174 223 ntBASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnrc6aQ3UHK8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.59■□□□□ 0.57
Tnrc6aQ3UHK8 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnrc6aQ3UHK8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnrc6aQ3UHK8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnrc6aQ3UHK8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnrc6aQ3UHK8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnrc6aQ3UHK8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Tnrc6aQ3UHK8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnrc6aQ3UHK8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnrc6aQ3UHK8 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnrc6aQ3UHK8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms