Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Spg11Q3UHA3 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC18.74■□□□□ 0.59
Spg11Q3UHA3 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.74■□□□□ 0.59
Spg11Q3UHA3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Spg11Q3UHA3 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.74■□□□□ 0.59
Spg11Q3UHA3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Spg11Q3UHA3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Spg11Q3UHA3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Gm7367-201ENSMUST00000057611 492 ntBASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Spg11Q3UHA3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Spg11Q3UHA3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Gm18101-201ENSMUST00000215769 548 ntBASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Gm13146-201ENSMUST00000118508 780 ntBASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.7■□□□□ 0.58
Spg11Q3UHA3 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Spg11Q3UHA3 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Spg11Q3UHA3 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Spg11Q3UHA3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Spg11Q3UHA3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Spg11Q3UHA3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Gm6420-201ENSMUST00000193885 723 ntBASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Spg11Q3UHA3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Gm10231-201ENSMUST00000181584 441 ntBASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Gm10175-202ENSMUST00000208752 441 ntBASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Spg11Q3UHA3 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms