Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Gm15820-201ENSMUST00000201566 728 ntBASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Fndc4Q3TR08 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Fndc4Q3TR08 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Gm10399-202ENSMUST00000202768 748 ntBASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Fndc4Q3TR08 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Fndc4Q3TR08 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Fndc4Q3TR08 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Fndc4Q3TR08 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Fndc4Q3TR08 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms