Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Gm10033-202ENSMUST00000211874 928 ntBASIC18.67■□□□□ 0.58
Treml4Q3LRV9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Treml4Q3LRV9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Treml4Q3LRV9 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Treml4Q3LRV9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Treml4Q3LRV9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Treml4Q3LRV9 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Gm27011-201ENSMUST00000182352 972 ntBASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Treml4Q3LRV9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Treml4Q3LRV9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Golph3-202ENSMUST00000226517 2359 ntBASIC18.6■□□□□ 0.57
Treml4Q3LRV9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Treml4Q3LRV9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Treml4Q3LRV9 Gm12933-201ENSMUST00000120203 872 ntBASIC18.58■□□□□ 0.56
Treml4Q3LRV9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Treml4Q3LRV9 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Treml4Q3LRV9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Treml4Q3LRV9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Treml4Q3LRV9 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Treml4Q3LRV9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Treml4Q3LRV9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Treml4Q3LRV9 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms