Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox4Q06831 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.6■□□□□ 0.73
Sox4Q06831 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sox4Q06831 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Sox4Q06831 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Sox4Q06831 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sox4Q06831 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox4Q06831 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox4Q06831 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sox4Q06831 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Sox4Q06831 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.58■□□□□ 0.73
Sox4Q06831 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.58■□□□□ 0.72
Sox4Q06831 Gm8493-201ENSMUST00000196881 489 ntBASIC19.58■□□□□ 0.72
Sox4Q06831 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox4Q06831 Spcs1-204ENSMUST00000226782 949 ntBASIC19.58■□□□□ 0.72
Sox4Q06831 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox4Q06831 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Sox4Q06831 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Sox4Q06831 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
Sox4Q06831 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.57■□□□□ 0.72
Sox4Q06831 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.57■□□□□ 0.72
Sox4Q06831 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox4Q06831 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.56■□□□□ 0.72
Sox4Q06831 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Sox4Q06831 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Sox4Q06831 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.56■□□□□ 0.72
Sox4Q06831 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Sox4Q06831 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.56■□□□□ 0.72
Sox4Q06831 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox4Q06831 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
Sox4Q06831 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Sox4Q06831 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Sox4Q06831 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.55■□□□□ 0.72
Sox4Q06831 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox4Q06831 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
Sox4Q06831 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 Gm15039-201ENSMUST00000118914 875 ntBASIC19.54■□□□□ 0.72
Sox4Q06831 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.54■□□□□ 0.72
Sox4Q06831 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.54■□□□□ 0.72
Sox4Q06831 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.54■□□□□ 0.72
Sox4Q06831 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sox4Q06831 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
Sox4Q06831 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Sox4Q06831 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.53■□□□□ 0.72
Sox4Q06831 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sox4Q06831 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox4Q06831 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sox4Q06831 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox4Q06831 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox4Q06831 Gm43017-201ENSMUST00000198296 752 ntBASIC19.52■□□□□ 0.72
Sox4Q06831 Gm43173-201ENSMUST00000202246 593 ntBASIC19.52■□□□□ 0.72
Sox4Q06831 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox4Q06831 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox4Q06831 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox4Q06831 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sox4Q06831 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
Sox4Q06831 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sox4Q06831 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.51■□□□□ 0.71
Sox4Q06831 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sox4Q06831 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms