Protein–RNA interactions for Protein: Q01815

Cacna1c, Voltage-dependent L-type calcium channel subunit alpha-1C, mousemouse

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1cQ01815 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1cQ01815 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.43■□□□□ 0.7
Cacna1cQ01815 Gm40881-201ENSMUST00000223397 166 ntBASIC19.43■□□□□ 0.7
Cacna1cQ01815 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1cQ01815 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1cQ01815 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.43■□□□□ 0.7
Cacna1cQ01815 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1cQ01815 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1cQ01815 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.41■□□□□ 0.7
Cacna1cQ01815 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1cQ01815 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.41■□□□□ 0.7
Cacna1cQ01815 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.4■□□□□ 0.7
Cacna1cQ01815 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1cQ01815 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1cQ01815 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.39■□□□□ 0.69
Cacna1cQ01815 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Gm43530-201ENSMUST00000195920 274 ntBASIC19.39■□□□□ 0.69
Cacna1cQ01815 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.39■□□□□ 0.69
Cacna1cQ01815 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1cQ01815 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.38■□□□□ 0.69
Cacna1cQ01815 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1cQ01815 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Gm9959-201ENSMUST00000068277 390 ntBASIC19.36■□□□□ 0.69
Cacna1cQ01815 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Cacna1cQ01815 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Cacna1cQ01815 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms