Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H3f3aP84244 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3f3aP84244 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.74■□□□□ 0.43
H3f3aP84244 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
H3f3aP84244 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.73■□□□□ 0.43
H3f3aP84244 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
H3f3aP84244 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.73■□□□□ 0.43
H3f3aP84244 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
H3f3aP84244 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.72■□□□□ 0.43
H3f3aP84244 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.72■□□□□ 0.43
H3f3aP84244 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
H3f3aP84244 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
H3f3aP84244 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.72■□□□□ 0.43
H3f3aP84244 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
H3f3aP84244 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Gm12821-201ENSMUST00000120022 600 ntBASIC17.71■□□□□ 0.43
H3f3aP84244 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
H3f3aP84244 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
H3f3aP84244 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
H3f3aP84244 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.71■□□□□ 0.43
H3f3aP84244 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.71■□□□□ 0.42
H3f3aP84244 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
H3f3aP84244 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3f3aP84244 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3f3aP84244 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
H3f3aP84244 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3f3aP84244 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
H3f3aP84244 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
H3f3aP84244 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
H3f3aP84244 Gm43137-201ENSMUST00000198052 594 ntBASIC17.69■□□□□ 0.42
H3f3aP84244 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.69■□□□□ 0.42
H3f3aP84244 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
H3f3aP84244 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
H3f3aP84244 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
H3f3aP84244 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.68■□□□□ 0.42
H3f3aP84244 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.68■□□□□ 0.42
H3f3aP84244 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
H3f3aP84244 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
H3f3aP84244 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
H3f3aP84244 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
H3f3aP84244 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.67■□□□□ 0.42
H3f3aP84244 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.67■□□□□ 0.42
H3f3aP84244 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.67■□□□□ 0.42
H3f3aP84244 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.67■□□□□ 0.42
H3f3aP84244 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H3f3aP84244 Gm27454-201ENSMUST00000185090 204 ntBASIC17.67■□□□□ 0.42
H3f3aP84244 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.67■□□□□ 0.42
H3f3aP84244 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
H3f3aP84244 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
H3f3aP84244 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3aP84244 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3aP84244 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.66■□□□□ 0.42
H3f3aP84244 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3aP84244 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
H3f3aP84244 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3aP84244 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
H3f3aP84244 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3aP84244 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3aP84244 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
H3f3aP84244 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.65■□□□□ 0.42
H3f3aP84244 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
H3f3aP84244 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms