Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC16.63■□□□□ 0.25
SgcaP82350 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SgcaP82350 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.62■□□□□ 0.25
SgcaP82350 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SgcaP82350 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.62■□□□□ 0.25
SgcaP82350 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SgcaP82350 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.61■□□□□ 0.25
SgcaP82350 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.61■□□□□ 0.25
SgcaP82350 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.61■□□□□ 0.25
SgcaP82350 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SgcaP82350 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.6■□□□□ 0.25
SgcaP82350 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.6■□□□□ 0.25
SgcaP82350 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.6■□□□□ 0.25
SgcaP82350 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SgcaP82350 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SgcaP82350 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.6■□□□□ 0.25
SgcaP82350 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SgcaP82350 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SgcaP82350 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SgcaP82350 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SgcaP82350 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcaP82350 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcaP82350 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SgcaP82350 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.58■□□□□ 0.24
SgcaP82350 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.58■□□□□ 0.24
SgcaP82350 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SgcaP82350 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
SgcaP82350 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SgcaP82350 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SgcaP82350 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SgcaP82350 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SgcaP82350 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SgcaP82350 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SgcaP82350 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms