Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Etf1-202ENSMUST00000180351 108 ntBASIC17.24■□□□□ 0.35
Atf1P81269 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Atf1P81269 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Atf1P81269 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Atf1P81269 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Atf1P81269 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf1P81269 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf1P81269 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Atf1P81269 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Atf1P81269 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
Atf1P81269 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Atf1P81269 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.22■□□□□ 0.35
Atf1P81269 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf1P81269 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Gm43530-201ENSMUST00000195920 274 ntBASIC17.22■□□□□ 0.35
Atf1P81269 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.22■□□□□ 0.35
Atf1P81269 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Atf1P81269 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Atf1P81269 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.21■□□□□ 0.35
Atf1P81269 Mir6236-201ENSMUST00000184437 123 ntBASIC17.21■□□□□ 0.35
Atf1P81269 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.21■□□□□ 0.35
Atf1P81269 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Atf1P81269 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Atf1P81269 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Atf1P81269 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Atf1P81269 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.2■□□□□ 0.34
Atf1P81269 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.2■□□□□ 0.34
Atf1P81269 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Atf1P81269 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Atf1P81269 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.2■□□□□ 0.34
Atf1P81269 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Atf1P81269 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Atf1P81269 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.19■□□□□ 0.34
Atf1P81269 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Atf1P81269 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Atf1P81269 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
Atf1P81269 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Atf1P81269 Gm9959-201ENSMUST00000068277 390 ntBASIC17.18■□□□□ 0.34
Atf1P81269 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Atf1P81269 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Atf1P81269 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.17■□□□□ 0.34
Atf1P81269 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Atf1P81269 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf1P81269 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Atf1P81269 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atf1P81269 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.16■□□□□ 0.34
Atf1P81269 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf1P81269 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Atf1P81269 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Atf1P81269 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Atf1P81269 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Atf1P81269 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Atf1P81269 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Atf1P81269 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms