Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.86■□□□□ 0.77
Ldb1P70662 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ldb1P70662 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ldb1P70662 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ldb1P70662 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ldb1P70662 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ldb1P70662 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Ldb1P70662 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.84■□□□□ 0.77
Ldb1P70662 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.84■□□□□ 0.77
Ldb1P70662 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.84■□□□□ 0.77
Ldb1P70662 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ldb1P70662 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ldb1P70662 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ldb1P70662 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Ldb1P70662 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ldb1P70662 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ldb1P70662 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ldb1P70662 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ldb1P70662 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
Ldb1P70662 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.82■□□□□ 0.76
Ldb1P70662 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ldb1P70662 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Ldb1P70662 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.81■□□□□ 0.76
Ldb1P70662 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.81■□□□□ 0.76
Ldb1P70662 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.81■□□□□ 0.76
Ldb1P70662 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.81■□□□□ 0.76
Ldb1P70662 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Ldb1P70662 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ldb1P70662 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ldb1P70662 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.8■□□□□ 0.76
Ldb1P70662 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ldb1P70662 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.79■□□□□ 0.76
Ldb1P70662 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ldb1P70662 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ldb1P70662 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.78■□□□□ 0.76
Ldb1P70662 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ldb1P70662 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ldb1P70662 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ldb1P70662 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ldb1P70662 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.78■□□□□ 0.76
Ldb1P70662 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ldb1P70662 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Ldb1P70662 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
Ldb1P70662 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Mir6236-201ENSMUST00000184437 123 ntBASIC19.77■□□□□ 0.76
Ldb1P70662 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ldb1P70662 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms