Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Shox2P70390 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.79■□□□□ 0.76
Shox2P70390 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Shox2P70390 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Shox2P70390 Gm38342-201ENSMUST00000195710 2980 ntBASIC19.77■□□□□ 0.76
Shox2P70390 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.77■□□□□ 0.76
Shox2P70390 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shox2P70390 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Gm7432-201ENSMUST00000210343 879 ntBASIC19.77■□□□□ 0.76
Shox2P70390 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shox2P70390 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shox2P70390 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shox2P70390 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.76■□□□□ 0.75
Shox2P70390 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shox2P70390 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.76■□□□□ 0.75
Shox2P70390 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.75■□□□□ 0.75
Shox2P70390 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.75■□□□□ 0.75
Shox2P70390 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shox2P70390 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Shox2P70390 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.75■□□□□ 0.75
Shox2P70390 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shox2P70390 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shox2P70390 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shox2P70390 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shox2P70390 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shox2P70390 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.75■□□□□ 0.75
Shox2P70390 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.74■□□□□ 0.75
Shox2P70390 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.74■□□□□ 0.75
Shox2P70390 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.74■□□□□ 0.75
Shox2P70390 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Shox2P70390 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.74■□□□□ 0.75
Shox2P70390 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Shox2P70390 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Grk6-206ENSMUST00000224995 2971 ntBASIC19.73■□□□□ 0.75
Shox2P70390 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shox2P70390 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Shox2P70390 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.72■□□□□ 0.75
Shox2P70390 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shox2P70390 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shox2P70390 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shox2P70390 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Shox2P70390 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shox2P70390 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shox2P70390 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shox2P70390 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shox2P70390 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shox2P70390 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Shox2P70390 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shox2P70390 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms