Protein–RNA interactions for Protein: P62069

Usp46, Ubiquitin carboxyl-terminal hydrolase 46, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp46P62069 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Usp46P62069 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.83■□□□□ 0.93
Usp46P62069 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Usp46P62069 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Usp46P62069 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp46P62069 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Usp46P62069 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp46P62069 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp46P62069 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Usp46P62069 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.81■□□□□ 0.92
Usp46P62069 Mir6236-201ENSMUST00000184437 123 ntBASIC20.81■□□□□ 0.92
Usp46P62069 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Usp46P62069 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Usp46P62069 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Usp46P62069 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
Usp46P62069 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.79■□□□□ 0.92
Usp46P62069 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Usp46P62069 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp46P62069 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.79■□□□□ 0.92
Usp46P62069 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Usp46P62069 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Usp46P62069 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp46P62069 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp46P62069 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp46P62069 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Usp46P62069 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
Usp46P62069 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
Usp46P62069 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp46P62069 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Usp46P62069 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Usp46P62069 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.78■□□□□ 0.92
Usp46P62069 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp46P62069 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Usp46P62069 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp46P62069 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Usp46P62069 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Usp46P62069 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp46P62069 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Usp46P62069 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.76■□□□□ 0.91
Usp46P62069 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp46P62069 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Usp46P62069 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp46P62069 Iqck-206ENSMUST00000208658 2891 ntBASIC20.76■□□□□ 0.91
Usp46P62069 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp46P62069 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp46P62069 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Usp46P62069 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.75■□□□□ 0.91
Usp46P62069 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Usp46P62069 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Gm26833-201ENSMUST00000180899 440 ntBASIC20.75■□□□□ 0.91
Usp46P62069 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp46P62069 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Usp46P62069 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.75■□□□□ 0.91
Usp46P62069 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Usp46P62069 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Smad6-203ENSMUST00000179458 273 ntBASIC20.74■□□□□ 0.91
Usp46P62069 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Usp46P62069 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.73■□□□□ 0.91
Usp46P62069 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp46P62069 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.73■□□□□ 0.91
Usp46P62069 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp46P62069 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp46P62069 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.73■□□□□ 0.91
Usp46P62069 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Usp46P62069 Gm40848-201ENSMUST00000221998 324 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms