Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Sec61a1P61620 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Sec61a1P61620 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Sec61a1P61620 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.4■□□□□ 0.38
Sec61a1P61620 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.4■□□□□ 0.38
Sec61a1P61620 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.4■□□□□ 0.38
Sec61a1P61620 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.4■□□□□ 0.38
Sec61a1P61620 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.4■□□□□ 0.38
Sec61a1P61620 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Sec61a1P61620 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.39■□□□□ 0.37
Sec61a1P61620 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sec61a1P61620 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.39■□□□□ 0.37
Sec61a1P61620 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Sec61a1P61620 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sec61a1P61620 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Sec61a1P61620 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.39■□□□□ 0.37
Sec61a1P61620 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sec61a1P61620 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sec61a1P61620 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sec61a1P61620 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a1P61620 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a1P61620 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sec61a1P61620 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sec61a1P61620 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Sec61a1P61620 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Sec61a1P61620 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sec61a1P61620 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.36■□□□□ 0.37
Sec61a1P61620 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sec61a1P61620 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.35■□□□□ 0.37
Sec61a1P61620 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.35■□□□□ 0.37
Sec61a1P61620 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sec61a1P61620 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sec61a1P61620 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Sec61a1P61620 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sec61a1P61620 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sec61a1P61620 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
Sec61a1P61620 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Sec61a1P61620 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.34■□□□□ 0.37
Sec61a1P61620 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Sec61a1P61620 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a1P61620 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a1P61620 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a1P61620 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Sec61a1P61620 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a1P61620 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.33■□□□□ 0.37
Sec61a1P61620 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Sec61a1P61620 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Sec61a1P61620 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.33■□□□□ 0.36
Sec61a1P61620 Gm22238-201ENSMUST00000175222 88 ntBASIC17.33■□□□□ 0.36
Sec61a1P61620 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms