Protein–RNA interactions for Protein: P58321

Uchl4, Ubiquitin carboxyl-terminal hydrolase isozyme L4, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uchl4P58321 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
Uchl4P58321 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Uchl4P58321 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uchl4P58321 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Uchl4P58321 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.16■□□□□ 0.98
Uchl4P58321 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Uchl4P58321 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uchl4P58321 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Uchl4P58321 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Uchl4P58321 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Uchl4P58321 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Uchl4P58321 Gm8493-201ENSMUST00000196881 489 ntBASIC21.15■□□□□ 0.98
Uchl4P58321 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Uchl4P58321 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uchl4P58321 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uchl4P58321 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uchl4P58321 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uchl4P58321 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.14■□□□□ 0.98
Uchl4P58321 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl4P58321 Gm43017-201ENSMUST00000198296 752 ntBASIC21.14■□□□□ 0.97
Uchl4P58321 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Uchl4P58321 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl4P58321 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl4P58321 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl4P58321 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uchl4P58321 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Uchl4P58321 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Uchl4P58321 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.13■□□□□ 0.97
Uchl4P58321 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC21.13■□□□□ 0.97
Uchl4P58321 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uchl4P58321 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Uchl4P58321 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Uchl4P58321 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uchl4P58321 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Uchl4P58321 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Uchl4P58321 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.11■□□□□ 0.97
Uchl4P58321 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.11■□□□□ 0.97
Uchl4P58321 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uchl4P58321 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.1■□□□□ 0.97
Uchl4P58321 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.1■□□□□ 0.97
Uchl4P58321 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Uchl4P58321 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Uchl4P58321 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uchl4P58321 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uchl4P58321 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Uchl4P58321 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms