Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rp1P56716 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.62■□□□□ 0.89
Rp1P56716 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.62■□□□□ 0.89
Rp1P56716 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.61■□□□□ 0.89
Rp1P56716 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rp1P56716 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.61■□□□□ 0.89
Rp1P56716 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.61■□□□□ 0.89
Rp1P56716 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.61■□□□□ 0.89
Rp1P56716 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rp1P56716 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1P56716 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.6■□□□□ 0.89
Rp1P56716 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1P56716 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rp1P56716 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rp1P56716 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.6■□□□□ 0.89
Rp1P56716 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.59■□□□□ 0.89
Rp1P56716 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1P56716 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rp1P56716 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1P56716 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1P56716 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.59■□□□□ 0.89
Rp1P56716 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rp1P56716 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rp1P56716 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1P56716 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1P56716 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1P56716 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.58■□□□□ 0.89
Rp1P56716 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rp1P56716 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rp1P56716 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rp1P56716 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rp1P56716 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rp1P56716 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rp1P56716 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1P56716 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1P56716 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Rp1P56716 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rp1P56716 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Rp1P56716 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.56■□□□□ 0.88
Rp1P56716 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rp1P56716 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.55■□□□□ 0.88
Rp1P56716 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rp1P56716 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Rp1P56716 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.55■□□□□ 0.88
Rp1P56716 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rp1P56716 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rp1P56716 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1P56716 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1P56716 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rp1P56716 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.54■□□□□ 0.88
Rp1P56716 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rp1P56716 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.53■□□□□ 0.88
Rp1P56716 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1P56716 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1P56716 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rp1P56716 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rp1P56716 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Rp1P56716 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rp1P56716 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rp1P56716 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1P56716 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1P56716 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1P56716 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1P56716 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Rp1P56716 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rp1P56716 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rp1P56716 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1P56716 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1P56716 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1P56716 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rp1P56716 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms