Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.07■□□□□ 0.48
Cdh11P55288 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh11P55288 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.07■□□□□ 0.48
Cdh11P55288 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Cdh11P55288 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh11P55288 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh11P55288 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Cdh11P55288 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.07■□□□□ 0.48
Cdh11P55288 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cdh11P55288 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.06■□□□□ 0.48
Cdh11P55288 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Cdh11P55288 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cdh11P55288 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.05■□□□□ 0.48
Cdh11P55288 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.05■□□□□ 0.48
Cdh11P55288 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cdh11P55288 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdh11P55288 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cdh11P55288 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.04■□□□□ 0.48
Cdh11P55288 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh11P55288 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.03■□□□□ 0.48
Cdh11P55288 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh11P55288 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdh11P55288 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cdh11P55288 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdh11P55288 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.03■□□□□ 0.48
Cdh11P55288 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cdh11P55288 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cdh11P55288 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh11P55288 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.02■□□□□ 0.48
Cdh11P55288 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.02■□□□□ 0.48
Cdh11P55288 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh11P55288 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh11P55288 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh11P55288 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cdh11P55288 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.02■□□□□ 0.47
Cdh11P55288 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.01■□□□□ 0.47
Cdh11P55288 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.01■□□□□ 0.47
Cdh11P55288 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cdh11P55288 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh11P55288 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh11P55288 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh11P55288 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Cdh11P55288 Gm13241-201ENSMUST00000094493 780 ntBASIC18■□□□□ 0.47
Cdh11P55288 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cdh11P55288 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18■□□□□ 0.47
Cdh11P55288 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.99■□□□□ 0.47
Cdh11P55288 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Cdh11P55288 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh11P55288 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.99■□□□□ 0.47
Cdh11P55288 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh11P55288 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh11P55288 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cdh11P55288 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms