Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NcanP55066 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NcanP55066 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
NcanP55066 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.4■■□□□ 1.02
NcanP55066 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
NcanP55066 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NcanP55066 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
NcanP55066 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.39■■□□□ 1.01
NcanP55066 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NcanP55066 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
NcanP55066 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NcanP55066 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NcanP55066 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
NcanP55066 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
NcanP55066 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
NcanP55066 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.38■■□□□ 1.01
NcanP55066 Gm37856-201ENSMUST00000191634 999 ntBASIC21.38■■□□□ 1.01
NcanP55066 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
NcanP55066 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
NcanP55066 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NcanP55066 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
NcanP55066 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.37■■□□□ 1.01
NcanP55066 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.37■■□□□ 1.01
NcanP55066 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.36■■□□□ 1.01
NcanP55066 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.36■■□□□ 1.01
NcanP55066 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
NcanP55066 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.36■■□□□ 1.01
NcanP55066 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NcanP55066 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NcanP55066 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NcanP55066 Gm6365-201ENSMUST00000054711 744 ntBASIC21.35■■□□□ 1.01
NcanP55066 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
NcanP55066 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NcanP55066 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NcanP55066 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NcanP55066 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC21.34■■□□□ 1.01
NcanP55066 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.34■■□□□ 1.01
NcanP55066 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NcanP55066 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
NcanP55066 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NcanP55066 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC21.33■■□□□ 1.01
NcanP55066 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.33■■□□□ 1.01
NcanP55066 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NcanP55066 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NcanP55066 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.33■■□□□ 1.01
NcanP55066 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NcanP55066 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NcanP55066 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NcanP55066 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NcanP55066 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.32■■□□□ 1
NcanP55066 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.32■■□□□ 1
NcanP55066 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC21.32■■□□□ 1
NcanP55066 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NcanP55066 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.32■■□□□ 1
NcanP55066 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.32■■□□□ 1
NcanP55066 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NcanP55066 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.31■■□□□ 1
NcanP55066 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC21.31■■□□□ 1
NcanP55066 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NcanP55066 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NcanP55066 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NcanP55066 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.3■■□□□ 1
NcanP55066 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.3■■□□□ 1
NcanP55066 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NcanP55066 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NcanP55066 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.29■■□□□ 1
NcanP55066 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC21.29■■□□□ 1
NcanP55066 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.29■■□□□ 1
NcanP55066 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NcanP55066 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC21.29■■□□□ 1
NcanP55066 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NcanP55066 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
NcanP55066 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
NcanP55066 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.28■■□□□ 1
NcanP55066 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.27■■□□□ 1
NcanP55066 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms