Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
Msh6P54276 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Msh6P54276 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Msh6P54276 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC25.6■■□□□ 1.69
Msh6P54276 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Msh6P54276 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC25.59■■□□□ 1.69
Msh6P54276 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC25.59■■□□□ 1.69
Msh6P54276 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msh6P54276 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
Msh6P54276 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.59■■□□□ 1.69
Msh6P54276 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msh6P54276 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.59■■□□□ 1.69
Msh6P54276 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msh6P54276 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msh6P54276 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Msh6P54276 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Msh6P54276 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Msh6P54276 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.58■■□□□ 1.69
Msh6P54276 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Msh6P54276 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
Msh6P54276 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC25.57■■□□□ 1.68
Msh6P54276 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
Msh6P54276 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
Msh6P54276 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Msh6P54276 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Msh6P54276 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Msh6P54276 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
Msh6P54276 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
Msh6P54276 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Msh6P54276 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Gm11421-201ENSMUST00000122124 294 ntBASIC25.56■■□□□ 1.68
Msh6P54276 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
Msh6P54276 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
Msh6P54276 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Msh6P54276 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Msh6P54276 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Gm12669-201ENSMUST00000122162 1009 ntBASIC25.55■■□□□ 1.68
Msh6P54276 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.55■■□□□ 1.68
Msh6P54276 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC25.55■■□□□ 1.68
Msh6P54276 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Msh6P54276 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Msh6P54276 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Msh6P54276 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Msh6P54276 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Msh6P54276 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Msh6P54276 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC25.54■■□□□ 1.68
Msh6P54276 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Msh6P54276 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Msh6P54276 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
Msh6P54276 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC25.53■■□□□ 1.68
Msh6P54276 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
Msh6P54276 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC25.52■■□□□ 1.68
Msh6P54276 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Msh6P54276 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Msh6P54276 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
Msh6P54276 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC25.52■■□□□ 1.68
Msh6P54276 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC25.52■■□□□ 1.68
Msh6P54276 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC25.52■■□□□ 1.68
Msh6P54276 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Msh6P54276 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Msh6P54276 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.52■■□□□ 1.68
Msh6P54276 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Msh6P54276 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
Msh6P54276 Mir6236-201ENSMUST00000184437 123 ntBASIC25.51■■□□□ 1.67
Msh6P54276 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Msh6P54276 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Msh6P54276 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Msh6P54276 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Msh6P54276 Gm12933-201ENSMUST00000120203 872 ntBASIC25.5■■□□□ 1.67
Msh6P54276 Gm42778-201ENSMUST00000199644 553 ntBASIC25.5■■□□□ 1.67
Msh6P54276 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Msh6P54276 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Msh6P54276 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Msh6P54276 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Msh6P54276 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Msh6P54276 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Msh6P54276 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Msh6P54276 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Msh6P54276 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC25.48■■□□□ 1.67
Msh6P54276 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms