Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.94■□□□□ 0.46
Rfx3P48381 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx3P48381 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rfx3P48381 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rfx3P48381 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.93■□□□□ 0.46
Rfx3P48381 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rfx3P48381 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx3P48381 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx3P48381 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rfx3P48381 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rfx3P48381 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rfx3P48381 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx3P48381 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx3P48381 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.91■□□□□ 0.46
Rfx3P48381 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.91■□□□□ 0.46
Rfx3P48381 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rfx3P48381 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
Rfx3P48381 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.9■□□□□ 0.46
Rfx3P48381 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rfx3P48381 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.89■□□□□ 0.46
Rfx3P48381 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.89■□□□□ 0.46
Rfx3P48381 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rfx3P48381 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.89■□□□□ 0.45
Rfx3P48381 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.89■□□□□ 0.45
Rfx3P48381 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.89■□□□□ 0.45
Rfx3P48381 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Rfx3P48381 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rfx3P48381 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.88■□□□□ 0.45
Rfx3P48381 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rfx3P48381 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rfx3P48381 Gm7417-201ENSMUST00000192950 473 ntBASIC17.87■□□□□ 0.45
Rfx3P48381 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Rfx3P48381 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rfx3P48381 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx3P48381 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx3P48381 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx3P48381 Gm7143-201ENSMUST00000222811 859 ntBASIC17.86■□□□□ 0.45
Rfx3P48381 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rfx3P48381 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx3P48381 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rfx3P48381 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.85■□□□□ 0.45
Rfx3P48381 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rfx3P48381 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms