Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh2P43247 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh2P43247 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Msh2P43247 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.5■□□□□ 0.87
Msh2P43247 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.5■□□□□ 0.87
Msh2P43247 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Msh2P43247 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.49■□□□□ 0.87
Msh2P43247 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Msh2P43247 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Msh2P43247 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Msh2P43247 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Msh2P43247 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh2P43247 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Msh2P43247 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Msh2P43247 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.48■□□□□ 0.87
Msh2P43247 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.48■□□□□ 0.87
Msh2P43247 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Msh2P43247 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.47■□□□□ 0.87
Msh2P43247 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Msh2P43247 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Msh2P43247 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
Msh2P43247 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh2P43247 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh2P43247 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh2P43247 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Msh2P43247 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.46■□□□□ 0.87
Msh2P43247 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Msh2P43247 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Msh2P43247 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.45■□□□□ 0.86
Msh2P43247 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Msh2P43247 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.45■□□□□ 0.86
Msh2P43247 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh2P43247 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh2P43247 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh2P43247 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Msh2P43247 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Msh2P43247 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Msh2P43247 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.43■□□□□ 0.86
Msh2P43247 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Msh2P43247 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Msh2P43247 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh2P43247 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh2P43247 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh2P43247 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.42■□□□□ 0.86
Msh2P43247 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.42■□□□□ 0.86
Msh2P43247 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.42■□□□□ 0.86
Msh2P43247 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Msh2P43247 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh2P43247 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Msh2P43247 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.41■□□□□ 0.86
Msh2P43247 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.41■□□□□ 0.86
Msh2P43247 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Msh2P43247 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.4■□□□□ 0.86
Msh2P43247 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Msh2P43247 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh2P43247 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Msh2P43247 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Msh2P43247 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.39■□□□□ 0.85
Msh2P43247 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Msh2P43247 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.38■□□□□ 0.85
Msh2P43247 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Msh2P43247 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms