Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh4P39038 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh4P39038 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Cdh4P39038 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh4P39038 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Cdh4P39038 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh4P39038 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh4P39038 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh4P39038 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.01■□□□□ 0.63
Cdh4P39038 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh4P39038 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Cdh4P39038 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19■□□□□ 0.63
Cdh4P39038 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19■□□□□ 0.63
Cdh4P39038 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19■□□□□ 0.63
Cdh4P39038 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdh4P39038 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Cdh4P39038 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Cdh4P39038 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
Cdh4P39038 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.99■□□□□ 0.63
Cdh4P39038 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Cdh4P39038 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.99■□□□□ 0.63
Cdh4P39038 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Cdh4P39038 Gm45417-201ENSMUST00000209533 758 ntBASIC18.99■□□□□ 0.63
Cdh4P39038 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.99■□□□□ 0.63
Cdh4P39038 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Cdh4P39038 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Cdh4P39038 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.99■□□□□ 0.63
Cdh4P39038 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Cdh4P39038 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Cdh4P39038 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.98■□□□□ 0.63
Cdh4P39038 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Cdh4P39038 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.98■□□□□ 0.63
Cdh4P39038 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Cdh4P39038 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh4P39038 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh4P39038 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh4P39038 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh4P39038 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh4P39038 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Cdh4P39038 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Cdh4P39038 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Cdh4P39038 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Cdh4P39038 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Cdh4P39038 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Cdh4P39038 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Cdh4P39038 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Cdh4P39038 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Mir7075-201ENSMUST00000184187 82 ntBASIC18.94■□□□□ 0.62
Cdh4P39038 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Cdh4P39038 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Cdh4P39038 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Cdh4P39038 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.93■□□□□ 0.62
Cdh4P39038 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms