Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Slc6a11P31650 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a11P31650 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a11P31650 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a11P31650 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Slc6a11P31650 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a11P31650 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Slc6a11P31650 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a11P31650 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Slc6a11P31650 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.86■□□□□ 0.61
Slc6a11P31650 Gm12821-201ENSMUST00000120022 600 ntBASIC18.86■□□□□ 0.61
Slc6a11P31650 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Slc6a11P31650 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.86■□□□□ 0.61
Slc6a11P31650 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a11P31650 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a11P31650 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Slc6a11P31650 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Slc6a11P31650 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.85■□□□□ 0.61
Slc6a11P31650 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Slc6a11P31650 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Slc6a11P31650 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Slc6a11P31650 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.84■□□□□ 0.61
Slc6a11P31650 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
Slc6a11P31650 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Slc6a11P31650 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Slc6a11P31650 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.83■□□□□ 0.61
Slc6a11P31650 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a11P31650 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a11P31650 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Slc6a11P31650 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a11P31650 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.83■□□□□ 0.6
Slc6a11P31650 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a11P31650 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a11P31650 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Slc6a11P31650 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a11P31650 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Slc6a11P31650 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc6a11P31650 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.82■□□□□ 0.6
Slc6a11P31650 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
Slc6a11P31650 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Slc6a11P31650 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.82■□□□□ 0.6
Slc6a11P31650 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Slc6a11P31650 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.81■□□□□ 0.6
Slc6a11P31650 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Slc6a11P31650 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.81■□□□□ 0.6
Slc6a11P31650 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Slc6a11P31650 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.8■□□□□ 0.6
Slc6a11P31650 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Slc6a11P31650 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.8■□□□□ 0.6
Slc6a11P31650 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.8■□□□□ 0.6
Slc6a11P31650 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.8■□□□□ 0.6
Slc6a11P31650 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Slc6a11P31650 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Slc6a11P31650 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.79■□□□□ 0.6
Slc6a11P31650 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.79■□□□□ 0.6
Slc6a11P31650 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Slc6a11P31650 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms