Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.67■■□□□ 1.06
Pde6bP23440 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pde6bP23440 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.66■■□□□ 1.06
Pde6bP23440 Gm42569-201ENSMUST00000200539 472 ntBASIC21.66■■□□□ 1.06
Pde6bP23440 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pde6bP23440 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.65■■□□□ 1.06
Pde6bP23440 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Pde6bP23440 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pde6bP23440 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.65■■□□□ 1.06
Pde6bP23440 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pde6bP23440 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pde6bP23440 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pde6bP23440 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Pde6bP23440 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pde6bP23440 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.64■■□□□ 1.06
Pde6bP23440 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Pde6bP23440 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.64■■□□□ 1.05
Pde6bP23440 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.64■■□□□ 1.05
Pde6bP23440 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.64■■□□□ 1.05
Pde6bP23440 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pde6bP23440 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.63■■□□□ 1.05
Pde6bP23440 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pde6bP23440 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pde6bP23440 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.63■■□□□ 1.05
Pde6bP23440 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pde6bP23440 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pde6bP23440 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pde6bP23440 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pde6bP23440 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pde6bP23440 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.62■■□□□ 1.05
Pde6bP23440 Gm26571-201ENSMUST00000181399 666 ntBASIC21.62■■□□□ 1.05
Pde6bP23440 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.62■■□□□ 1.05
Pde6bP23440 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pde6bP23440 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Pde6bP23440 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.61■■□□□ 1.05
Pde6bP23440 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.61■■□□□ 1.05
Pde6bP23440 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pde6bP23440 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pde6bP23440 Gm27405-201ENSMUST00000184201 112 ntBASIC21.6■■□□□ 1.05
Pde6bP23440 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pde6bP23440 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pde6bP23440 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.58■■□□□ 1.05
Pde6bP23440 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.58■■□□□ 1.05
Pde6bP23440 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pde6bP23440 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pde6bP23440 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
Pde6bP23440 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Pde6bP23440 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Pde6bP23440 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.57■■□□□ 1.04
Pde6bP23440 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pde6bP23440 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pde6bP23440 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pde6bP23440 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pde6bP23440 Gm11421-201ENSMUST00000122124 294 ntBASIC21.56■■□□□ 1.04
Pde6bP23440 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pde6bP23440 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pde6bP23440 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.56■■□□□ 1.04
Pde6bP23440 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pde6bP23440 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.56■■□□□ 1.04
Pde6bP23440 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms