Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.79■□□□□ 0.6
ChrneP20782 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.79■□□□□ 0.6
ChrneP20782 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ChrneP20782 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ChrneP20782 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
ChrneP20782 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ChrneP20782 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ChrneP20782 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ChrneP20782 Gm27454-201ENSMUST00000185090 204 ntBASIC18.78■□□□□ 0.6
ChrneP20782 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.78■□□□□ 0.6
ChrneP20782 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ChrneP20782 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ChrneP20782 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ChrneP20782 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ChrneP20782 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.77■□□□□ 0.6
ChrneP20782 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ChrneP20782 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.77■□□□□ 0.6
ChrneP20782 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ChrneP20782 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ChrneP20782 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
ChrneP20782 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.76■□□□□ 0.59
ChrneP20782 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ChrneP20782 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.76■□□□□ 0.59
ChrneP20782 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChrneP20782 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.76■□□□□ 0.59
ChrneP20782 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.76■□□□□ 0.59
ChrneP20782 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ChrneP20782 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ChrneP20782 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
ChrneP20782 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ChrneP20782 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ChrneP20782 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChrneP20782 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.74■□□□□ 0.59
ChrneP20782 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChrneP20782 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.74■□□□□ 0.59
ChrneP20782 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChrneP20782 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ChrneP20782 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.73■□□□□ 0.59
ChrneP20782 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ChrneP20782 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ChrneP20782 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.72■□□□□ 0.59
ChrneP20782 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ChrneP20782 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ChrneP20782 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ChrneP20782 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ChrneP20782 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ChrneP20782 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ChrneP20782 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ChrneP20782 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ChrneP20782 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ChrneP20782 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.7■□□□□ 0.58
ChrneP20782 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ChrneP20782 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms