Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdx1P18111 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cdx1P18111 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cdx1P18111 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Cdx1P18111 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cdx1P18111 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cdx1P18111 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
Cdx1P18111 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Gm14117-201ENSMUST00000122417 843 ntBASIC15.89■□□□□ 0.13
Cdx1P18111 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC15.89■□□□□ 0.13
Cdx1P18111 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cdx1P18111 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cdx1P18111 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cdx1P18111 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.88■□□□□ 0.13
Cdx1P18111 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Cdx1P18111 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.88■□□□□ 0.13
Cdx1P18111 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.88■□□□□ 0.13
Cdx1P18111 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cdx1P18111 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cdx1P18111 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.87■□□□□ 0.13
Cdx1P18111 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdx1P18111 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Cdx1P18111 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cdx1P18111 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Cdx1P18111 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cdx1P18111 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC15.86■□□□□ 0.13
Cdx1P18111 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdx1P18111 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdx1P18111 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Cdx1P18111 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cdx1P18111 Gm9959-201ENSMUST00000068277 390 ntBASIC15.86■□□□□ 0.13
Cdx1P18111 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cdx1P18111 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.86■□□□□ 0.13
Cdx1P18111 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Cdx1P18111 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cdx1P18111 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Cdx1P18111 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Grk6-206ENSMUST00000224995 2971 ntBASIC15.85■□□□□ 0.13
Cdx1P18111 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cdx1P18111 Gm10232-201ENSMUST00000089221 720 ntBASIC15.85■□□□□ 0.13
Cdx1P18111 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms