Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm11421-201ENSMUST00000122124 294 ntBASIC20.55■□□□□ 0.88
Hmga1P17095 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.55■□□□□ 0.88
Hmga1P17095 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Hmga1P17095 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.55■□□□□ 0.88
Hmga1P17095 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Hmga1P17095 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmga1P17095 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hmga1P17095 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.54■□□□□ 0.88
Hmga1P17095 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
Hmga1P17095 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Hmga1P17095 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Hmga1P17095 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Hmga1P17095 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.53■□□□□ 0.88
Hmga1P17095 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Hmga1P17095 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.53■□□□□ 0.88
Hmga1P17095 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmga1P17095 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Hmga1P17095 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Hmga1P17095 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.53■□□□□ 0.88
Hmga1P17095 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.52■□□□□ 0.88
Hmga1P17095 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.52■□□□□ 0.88
Hmga1P17095 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga1P17095 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Hmga1P17095 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.51■□□□□ 0.87
Hmga1P17095 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga1P17095 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga1P17095 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Hmga1P17095 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.5■□□□□ 0.87
Hmga1P17095 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.5■□□□□ 0.87
Hmga1P17095 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hmga1P17095 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Hmga1P17095 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Hmga1P17095 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Hmga1P17095 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.49■□□□□ 0.87
Hmga1P17095 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.49■□□□□ 0.87
Hmga1P17095 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Hmga1P17095 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Hmga1P17095 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Hmga1P17095 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Hmga1P17095 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.47■□□□□ 0.87
Hmga1P17095 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hmga1P17095 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Gm26571-201ENSMUST00000181399 666 ntBASIC20.47■□□□□ 0.87
Hmga1P17095 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.47■□□□□ 0.87
Hmga1P17095 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.47■□□□□ 0.87
Hmga1P17095 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.47■□□□□ 0.87
Hmga1P17095 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.47■□□□□ 0.87
Hmga1P17095 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Hmga1P17095 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Hmga1P17095 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.46■□□□□ 0.87
Hmga1P17095 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Hmga1P17095 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Hmga1P17095 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.45■□□□□ 0.86
Hmga1P17095 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.45■□□□□ 0.86
Hmga1P17095 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Hmga1P17095 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Hmga1P17095 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Hmga1P17095 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.44■□□□□ 0.86
Hmga1P17095 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.44■□□□□ 0.86
Hmga1P17095 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms