Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.75■□□□□ 0.43
Ccl3P10855 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccl3P10855 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.75■□□□□ 0.43
Ccl3P10855 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl3P10855 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl3P10855 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccl3P10855 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ccl3P10855 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Ccl3P10855 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.74■□□□□ 0.43
Ccl3P10855 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl3P10855 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl3P10855 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccl3P10855 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl3P10855 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ccl3P10855 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl3P10855 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccl3P10855 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl3P10855 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccl3P10855 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.72■□□□□ 0.43
Ccl3P10855 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ccl3P10855 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.72■□□□□ 0.43
Ccl3P10855 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.71■□□□□ 0.43
Ccl3P10855 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ccl3P10855 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Ccl3P10855 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.71■□□□□ 0.43
Ccl3P10855 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Ccl3P10855 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.7■□□□□ 0.42
Ccl3P10855 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ccl3P10855 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccl3P10855 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccl3P10855 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccl3P10855 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccl3P10855 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccl3P10855 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Ccl3P10855 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccl3P10855 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Ccl3P10855 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.67■□□□□ 0.42
Ccl3P10855 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Ccl3P10855 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.67■□□□□ 0.42
Ccl3P10855 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccl3P10855 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccl3P10855 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl3P10855 Gm7514-201ENSMUST00000209475 934 ntBASIC17.66■□□□□ 0.42
Ccl3P10855 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl3P10855 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl3P10855 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccl3P10855 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
Ccl3P10855 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccl3P10855 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccl3P10855 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccl3P10855 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccl3P10855 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Ccl3P10855 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Ccl3P10855 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms