Protein–RNA interactions for Protein: P0C1Z5

Putative UPF0730 protein encoded by LINC00643 homolog, mousemouse

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P0C1Z5 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
P0C1Z5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
P0C1Z5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Mir6236-201ENSMUST00000184437 123 ntBASIC15.39■□□□□ 0.05
P0C1Z5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
P0C1Z5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.38■□□□□ 0.05
P0C1Z5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
P0C1Z5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.38■□□□□ 0.05
P0C1Z5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
P0C1Z5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.37■□□□□ 0.05
P0C1Z5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.37■□□□□ 0.05
P0C1Z5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
P0C1Z5 Iqck-206ENSMUST00000208658 2891 ntBASIC15.37■□□□□ 0.05
P0C1Z5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
P0C1Z5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
P0C1Z5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
P0C1Z5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.36■□□□□ 0.05
P0C1Z5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.36■□□□□ 0.05
P0C1Z5 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
P0C1Z5 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.36■□□□□ 0.05
P0C1Z5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
P0C1Z5 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
P0C1Z5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.35■□□□□ 0.05
P0C1Z5 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC15.35■□□□□ 0.05
P0C1Z5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC15.35■□□□□ 0.05
P0C1Z5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC15.35■□□□□ 0.05
P0C1Z5 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
P0C1Z5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
P0C1Z5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.34■□□□□ 0.05
P0C1Z5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.34■□□□□ 0.05
P0C1Z5 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
P0C1Z5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
P0C1Z5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.33■□□□□ 0.05
P0C1Z5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
P0C1Z5 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
P0C1Z5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
P0C1Z5 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
P0C1Z5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
P0C1Z5 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
P0C1Z5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
P0C1Z5 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.32■□□□□ 0.04
P0C1Z5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
P0C1Z5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.32■□□□□ 0.04
P0C1Z5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
P0C1Z5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms