Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ApoeP08226 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ApoeP08226 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ApoeP08226 Gm11175-201ENSMUST00000116172 543 ntBASIC18.81■□□□□ 0.6
ApoeP08226 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.81■□□□□ 0.6
ApoeP08226 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ApoeP08226 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
ApoeP08226 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.8■□□□□ 0.6
ApoeP08226 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ApoeP08226 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.79■□□□□ 0.6
ApoeP08226 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ApoeP08226 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.78■□□□□ 0.6
ApoeP08226 Gm12366-201ENSMUST00000121722 873 ntBASIC18.78■□□□□ 0.6
ApoeP08226 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.78■□□□□ 0.6
ApoeP08226 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.78■□□□□ 0.6
ApoeP08226 Gm5786-201ENSMUST00000085368 882 ntBASIC18.78■□□□□ 0.6
ApoeP08226 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.78■□□□□ 0.6
ApoeP08226 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ApoeP08226 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
ApoeP08226 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ApoeP08226 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.77■□□□□ 0.6
ApoeP08226 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ApoeP08226 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ApoeP08226 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ApoeP08226 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ApoeP08226 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ApoeP08226 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ApoeP08226 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ApoeP08226 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ApoeP08226 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ApoeP08226 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ApoeP08226 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ApoeP08226 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ApoeP08226 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ApoeP08226 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.75■□□□□ 0.59
ApoeP08226 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.74■□□□□ 0.59
ApoeP08226 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
ApoeP08226 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ApoeP08226 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ApoeP08226 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ApoeP08226 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
ApoeP08226 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ApoeP08226 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ApoeP08226 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms