Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
P04940 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04940 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
P04940 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.23■□□□□ 0.19
P04940 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
P04940 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.23■□□□□ 0.19
P04940 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
P04940 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 Notumos-201ENSMUST00000151998 2659 ntBASIC16.22■□□□□ 0.19
P04940 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
P04940 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
P04940 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
P04940 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
P04940 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
P04940 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
P04940 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P04940 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04940 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
P04940 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
P04940 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
P04940 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC16.21■□□□□ 0.18
P04940 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.2■□□□□ 0.18
P04940 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
P04940 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04940 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
P04940 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04940 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.19■□□□□ 0.18
P04940 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.19■□□□□ 0.18
P04940 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.18■□□□□ 0.18
P04940 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04940 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04940 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04940 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
P04940 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04940 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04940 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04940 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04940 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
P04940 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC16.17■□□□□ 0.18
P04940 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04940 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.17■□□□□ 0.18
P04940 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
P04940 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.16■□□□□ 0.18
P04940 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
P04940 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
P04940 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.16■□□□□ 0.18
P04940 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
P04940 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
P04940 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.15■□□□□ 0.18
P04940 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
P04940 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.15■□□□□ 0.18
P04940 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.15■□□□□ 0.18
P04940 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
P04940 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Gm9847-201ENSMUST00000052528 599 ntBASIC16.15■□□□□ 0.18
P04940 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16.15■□□□□ 0.18
P04940 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
P04940 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
P04940 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
P04940 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
P04940 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms