Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PrnpP04925 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrnpP04925 Gm10602-201ENSMUST00000098239 609 ntBASIC20.82■□□□□ 0.92
PrnpP04925 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PrnpP04925 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.82■□□□□ 0.92
PrnpP04925 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PrnpP04925 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PrnpP04925 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PrnpP04925 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PrnpP04925 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrnpP04925 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.8■□□□□ 0.92
PrnpP04925 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.8■□□□□ 0.92
PrnpP04925 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PrnpP04925 Reep4-203ENSMUST00000226563 1444 ntBASIC20.79■□□□□ 0.92
PrnpP04925 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PrnpP04925 Gm12933-201ENSMUST00000120203 872 ntBASIC20.79■□□□□ 0.92
PrnpP04925 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.79■□□□□ 0.92
PrnpP04925 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.79■□□□□ 0.92
PrnpP04925 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PrnpP04925 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PrnpP04925 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.78■□□□□ 0.92
PrnpP04925 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.78■□□□□ 0.92
PrnpP04925 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PrnpP04925 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PrnpP04925 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PrnpP04925 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PrnpP04925 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PrnpP04925 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PrnpP04925 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PrnpP04925 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
PrnpP04925 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.77■□□□□ 0.91
PrnpP04925 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrnpP04925 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrnpP04925 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrnpP04925 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrnpP04925 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
PrnpP04925 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PrnpP04925 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PrnpP04925 Gm27011-201ENSMUST00000182352 972 ntBASIC20.75■□□□□ 0.91
PrnpP04925 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.75■□□□□ 0.91
PrnpP04925 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.75■□□□□ 0.91
PrnpP04925 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PrnpP04925 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PrnpP04925 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.74■□□□□ 0.91
PrnpP04925 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PrnpP04925 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PrnpP04925 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.72■□□□□ 0.91
PrnpP04925 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PrnpP04925 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PrnpP04925 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.71■□□□□ 0.91
PrnpP04925 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.71■□□□□ 0.91
PrnpP04925 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PrnpP04925 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PrnpP04925 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PrnpP04925 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PrnpP04925 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.7■□□□□ 0.9
PrnpP04925 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PrnpP04925 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms