Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.5□□□□□ -0.09
TcraP01849 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TcraP01849 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TcraP01849 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.49□□□□□ -0.09
TcraP01849 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC14.49□□□□□ -0.09
TcraP01849 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TcraP01849 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TcraP01849 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.48□□□□□ -0.09
TcraP01849 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TcraP01849 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TcraP01849 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.48□□□□□ -0.09
TcraP01849 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TcraP01849 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TcraP01849 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
TcraP01849 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TcraP01849 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TcraP01849 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TcraP01849 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TcraP01849 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.45□□□□□ -0.1
TcraP01849 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TcraP01849 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TcraP01849 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TcraP01849 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TcraP01849 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.44□□□□□ -0.1
TcraP01849 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TcraP01849 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TcraP01849 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TcraP01849 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
TcraP01849 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TcraP01849 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms