Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
P01804 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01804 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
P01804 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
P01804 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.17■□□□□ 0.34
P01804 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.17■□□□□ 0.34
P01804 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.17■□□□□ 0.34
P01804 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
P01804 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
P01804 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.16■□□□□ 0.34
P01804 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P01804 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.16■□□□□ 0.34
P01804 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
P01804 Gm27454-201ENSMUST00000185090 204 ntBASIC17.16■□□□□ 0.34
P01804 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
P01804 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
P01804 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.16■□□□□ 0.34
P01804 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
P01804 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
P01804 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
P01804 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.15■□□□□ 0.34
P01804 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
P01804 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
P01804 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.14■□□□□ 0.33
P01804 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.14■□□□□ 0.33
P01804 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
P01804 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.14■□□□□ 0.33
P01804 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
P01804 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
P01804 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.12■□□□□ 0.33
P01804 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01804 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
P01804 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01804 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
P01804 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.11■□□□□ 0.33
P01804 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01804 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P01804 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P01804 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01804 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01804 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01804 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01804 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01804 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.1■□□□□ 0.33
P01804 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P01804 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01804 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01804 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P01804 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.1■□□□□ 0.33
P01804 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.1■□□□□ 0.33
P01804 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01804 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
P01804 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01804 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P01804 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01804 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01804 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
P01804 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
P01804 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01804 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms