Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.64■□□□□ 0.89
Syn1O88935 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Syn1O88935 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Syn1O88935 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Syn1O88935 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.63■□□□□ 0.89
Syn1O88935 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Syn1O88935 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Syn1O88935 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.62■□□□□ 0.89
Syn1O88935 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Syn1O88935 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC20.62■□□□□ 0.89
Syn1O88935 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syn1O88935 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syn1O88935 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.62■□□□□ 0.89
Syn1O88935 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Syn1O88935 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Syn1O88935 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.61■□□□□ 0.89
Syn1O88935 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.61■□□□□ 0.89
Syn1O88935 Gm5408-201ENSMUST00000197998 747 ntBASIC20.61■□□□□ 0.89
Syn1O88935 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.61■□□□□ 0.89
Syn1O88935 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.61■□□□□ 0.89
Syn1O88935 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Syn1O88935 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Syn1O88935 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Syn1O88935 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.6■□□□□ 0.89
Syn1O88935 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.59■□□□□ 0.89
Syn1O88935 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Syn1O88935 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.59■□□□□ 0.89
Syn1O88935 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.59■□□□□ 0.89
Syn1O88935 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Syn1O88935 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Syn1O88935 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Syn1O88935 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syn1O88935 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Syn1O88935 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Syn1O88935 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Syn1O88935 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.57■□□□□ 0.88
Syn1O88935 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.57■□□□□ 0.88
Syn1O88935 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.57■□□□□ 0.88
Syn1O88935 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Syn1O88935 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Syn1O88935 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syn1O88935 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Syn1O88935 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Syn1O88935 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Syn1O88935 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Syn1O88935 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.56■□□□□ 0.88
Syn1O88935 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.56■□□□□ 0.88
Syn1O88935 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syn1O88935 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.55■□□□□ 0.88
Syn1O88935 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Syn1O88935 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.55■□□□□ 0.88
Syn1O88935 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.55■□□□□ 0.88
Syn1O88935 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Syn1O88935 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syn1O88935 Gm13836-201ENSMUST00000121159 501 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms