Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn1O88551 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cldn1O88551 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.02■□□□□ 0.31
Cldn1O88551 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn1O88551 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cldn1O88551 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Cldn1O88551 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.01■□□□□ 0.31
Cldn1O88551 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Cldn1O88551 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.01■□□□□ 0.31
Cldn1O88551 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC17.01■□□□□ 0.31
Cldn1O88551 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.01■□□□□ 0.31
Cldn1O88551 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cldn1O88551 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.01■□□□□ 0.31
Cldn1O88551 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17■□□□□ 0.31
Cldn1O88551 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17■□□□□ 0.31
Cldn1O88551 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cldn1O88551 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cldn1O88551 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cldn1O88551 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cldn1O88551 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn1O88551 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.99■□□□□ 0.31
Cldn1O88551 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.99■□□□□ 0.31
Cldn1O88551 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cldn1O88551 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cldn1O88551 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC16.98■□□□□ 0.31
Cldn1O88551 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cldn1O88551 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cldn1O88551 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.97■□□□□ 0.31
Cldn1O88551 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cldn1O88551 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldn1O88551 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
Cldn1O88551 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.96■□□□□ 0.31
Cldn1O88551 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldn1O88551 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.96■□□□□ 0.31
Cldn1O88551 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cldn1O88551 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cldn1O88551 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Cldn1O88551 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn1O88551 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cldn1O88551 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.95■□□□□ 0.3
Cldn1O88551 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.95■□□□□ 0.3
Cldn1O88551 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn1O88551 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn1O88551 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.95■□□□□ 0.3
Cldn1O88551 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cldn1O88551 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn1O88551 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Cldn1O88551 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn1O88551 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
Cldn1O88551 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC16.94■□□□□ 0.3
Cldn1O88551 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.94■□□□□ 0.3
Cldn1O88551 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cldn1O88551 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cldn1O88551 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Cldn1O88551 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cldn1O88551 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn1O88551 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.93■□□□□ 0.3
Cldn1O88551 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms