Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tnfrsf17O88472 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf17O88472 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf17O88472 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Gm7290-201ENSMUST00000104990 617 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Gm12918-201ENSMUST00000120234 636 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Gm15710-201ENSMUST00000121821 636 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Gm5075-201ENSMUST00000196916 622 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf17O88472 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf17O88472 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf17O88472 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf17O88472 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf17O88472 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf17O88472 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Gm6365-201ENSMUST00000054711 744 ntBASIC18.6■□□□□ 0.57
Tnfrsf17O88472 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf17O88472 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Tnfrsf17O88472 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.58■□□□□ 0.57
Tnfrsf17O88472 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf17O88472 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Tnfrsf17O88472 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf17O88472 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf17O88472 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Trmt13-210ENSMUST00000198454 880 ntBASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf17O88472 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.56■□□□□ 0.56
Tnfrsf17O88472 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC18.55■□□□□ 0.56
Tnfrsf17O88472 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms