Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.33■□□□□ 0.52
Capns1O88456 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Capns1O88456 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capns1O88456 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Serp2-204ENSMUST00000228055 705 ntBASIC18.32■□□□□ 0.52
Capns1O88456 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Capns1O88456 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Capns1O88456 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capns1O88456 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.31■□□□□ 0.52
Capns1O88456 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Capns1O88456 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capns1O88456 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Capns1O88456 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.3■□□□□ 0.52
Capns1O88456 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capns1O88456 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Capns1O88456 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capns1O88456 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capns1O88456 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capns1O88456 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capns1O88456 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capns1O88456 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.28■□□□□ 0.52
Capns1O88456 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Capns1O88456 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.28■□□□□ 0.52
Capns1O88456 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.28■□□□□ 0.52
Capns1O88456 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capns1O88456 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Capns1O88456 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.27■□□□□ 0.52
Capns1O88456 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Capns1O88456 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Capns1O88456 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Capns1O88456 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.27■□□□□ 0.51
Capns1O88456 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.26■□□□□ 0.51
Capns1O88456 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.26■□□□□ 0.51
Capns1O88456 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.26■□□□□ 0.51
Capns1O88456 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capns1O88456 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Capns1O88456 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Capns1O88456 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capns1O88456 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capns1O88456 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.25■□□□□ 0.51
Capns1O88456 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.25■□□□□ 0.51
Capns1O88456 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.25■□□□□ 0.51
Capns1O88456 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Capns1O88456 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capns1O88456 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.25■□□□□ 0.51
Capns1O88456 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Capns1O88456 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Capns1O88456 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.24■□□□□ 0.51
Capns1O88456 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Capns1O88456 Gm13241-201ENSMUST00000094493 780 ntBASIC18.24■□□□□ 0.51
Capns1O88456 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Capns1O88456 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.24■□□□□ 0.51
Capns1O88456 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Capns1O88456 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Capns1O88456 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Capns1O88456 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Capns1O88456 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Capns1O88456 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Capns1O88456 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Capns1O88456 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Capns1O88456 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms