Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.56■□□□□ 0.56
Tulp3O88413 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.56■□□□□ 0.56
Tulp3O88413 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tulp3O88413 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Mir6538-201ENSMUST00000183713 110 ntBASIC18.55■□□□□ 0.56
Tulp3O88413 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18.55■□□□□ 0.56
Tulp3O88413 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Tulp3O88413 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Tulp3O88413 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.54■□□□□ 0.56
Tulp3O88413 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Tulp3O88413 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Tulp3O88413 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Tulp3O88413 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tulp3O88413 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tulp3O88413 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Tulp3O88413 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.53■□□□□ 0.56
Tulp3O88413 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tulp3O88413 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Tulp3O88413 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.53■□□□□ 0.56
Tulp3O88413 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Tulp3O88413 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Tulp3O88413 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.52■□□□□ 0.56
Tulp3O88413 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Tulp3O88413 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tulp3O88413 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tulp3O88413 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Tulp3O88413 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tulp3O88413 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tulp3O88413 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tulp3O88413 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Tulp3O88413 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.51■□□□□ 0.55
Tulp3O88413 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Tulp3O88413 Gm45444-201ENSMUST00000211394 898 ntBASIC18.51■□□□□ 0.55
Tulp3O88413 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.51■□□□□ 0.55
Tulp3O88413 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Tulp3O88413 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Tulp3O88413 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.5■□□□□ 0.55
Tulp3O88413 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.5■□□□□ 0.55
Tulp3O88413 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Tulp3O88413 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.49■□□□□ 0.55
Tulp3O88413 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.49■□□□□ 0.55
Tulp3O88413 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.49■□□□□ 0.55
Tulp3O88413 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.49■□□□□ 0.55
Tulp3O88413 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.49■□□□□ 0.55
Tulp3O88413 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Tulp3O88413 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.48■□□□□ 0.55
Tulp3O88413 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.48■□□□□ 0.55
Tulp3O88413 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
Tulp3O88413 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Tulp3O88413 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Tulp3O88413 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Tulp3O88413 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms