Protein–RNA interactions for Protein: O88255

Gm10509, Mszf57 (Fragment), mousemouse

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10509O88255 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm10509O88255 Gm43530-201ENSMUST00000195920 274 ntBASIC14.23□□□□□ -0.13
Gm10509O88255 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.23□□□□□ -0.13
Gm10509O88255 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Gm10509O88255 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm10509O88255 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Gm10509O88255 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Gm10509O88255 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC14.22□□□□□ -0.13
Gm10509O88255 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.22□□□□□ -0.13
Gm10509O88255 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC14.22□□□□□ -0.13
Gm10509O88255 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gm10509O88255 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm10509O88255 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Gm10509O88255 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Gm10509O88255 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC14.21□□□□□ -0.13
Gm10509O88255 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gm10509O88255 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm10509O88255 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm10509O88255 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Gm10509O88255 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Gm15820-201ENSMUST00000201566 728 ntBASIC14.2□□□□□ -0.14
Gm10509O88255 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.2□□□□□ -0.14
Gm10509O88255 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
Gm10509O88255 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm10509O88255 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Gm5522-201ENSMUST00000189483 1242 ntBASIC14.19□□□□□ -0.14
Gm10509O88255 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.19□□□□□ -0.14
Gm10509O88255 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Gm10509O88255 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Gm10509O88255 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Gm10509O88255 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC14.18□□□□□ -0.14
Gm10509O88255 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Gm6802-201ENSMUST00000167843 1983 ntBASIC14.18□□□□□ -0.14
Gm10509O88255 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Gm7417-201ENSMUST00000192950 473 ntBASIC14.18□□□□□ -0.14
Gm10509O88255 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Gm10509O88255 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Gm10509O88255 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Gm10509O88255 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm10509O88255 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.17□□□□□ -0.14
Gm10509O88255 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.17□□□□□ -0.14
Gm10509O88255 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Gm10509O88255 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms