Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.04■□□□□ 0.48
Pdlim3O70209 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pdlim3O70209 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim3O70209 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.03■□□□□ 0.48
Pdlim3O70209 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pdlim3O70209 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pdlim3O70209 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdlim3O70209 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC18.02■□□□□ 0.48
Pdlim3O70209 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pdlim3O70209 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.02■□□□□ 0.47
Pdlim3O70209 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim3O70209 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pdlim3O70209 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
Pdlim3O70209 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.01■□□□□ 0.47
Pdlim3O70209 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.01■□□□□ 0.47
Pdlim3O70209 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pdlim3O70209 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Pdlim3O70209 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim3O70209 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18■□□□□ 0.47
Pdlim3O70209 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim3O70209 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pdlim3O70209 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pdlim3O70209 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Pdlim3O70209 Gm10399-202ENSMUST00000202768 748 ntBASIC17.99■□□□□ 0.47
Pdlim3O70209 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.99■□□□□ 0.47
Pdlim3O70209 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Pdlim3O70209 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.98■□□□□ 0.47
Pdlim3O70209 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Pdlim3O70209 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Pdlim3O70209 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Pdlim3O70209 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Pdlim3O70209 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.97■□□□□ 0.47
Pdlim3O70209 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC17.97■□□□□ 0.47
Pdlim3O70209 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Pdlim3O70209 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Pdlim3O70209 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Pdlim3O70209 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Pdlim3O70209 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Pdlim3O70209 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.96■□□□□ 0.47
Pdlim3O70209 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Pdlim3O70209 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Pdlim3O70209 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.95■□□□□ 0.46
Pdlim3O70209 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms