Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Kcnu1O54982 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Kcnu1O54982 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kcnu1O54982 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kcnu1O54982 Gm14117-201ENSMUST00000122417 843 ntBASIC21.29■■□□□ 1
Kcnu1O54982 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Kcnu1O54982 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Kcnu1O54982 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Kcnu1O54982 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnu1O54982 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnu1O54982 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.28■■□□□ 1
Kcnu1O54982 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.28■■□□□ 1
Kcnu1O54982 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnu1O54982 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kcnu1O54982 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kcnu1O54982 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.28■■□□□ 1
Kcnu1O54982 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kcnu1O54982 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcnu1O54982 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.27■■□□□ 1
Kcnu1O54982 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kcnu1O54982 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.26■□□□□ 0.99
Kcnu1O54982 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcnu1O54982 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.26■□□□□ 0.99
Kcnu1O54982 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcnu1O54982 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kcnu1O54982 Gm45102-201ENSMUST00000207427 857 ntBASIC21.26■□□□□ 0.99
Kcnu1O54982 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Kcnu1O54982 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kcnu1O54982 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kcnu1O54982 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Iqck-206ENSMUST00000208658 2891 ntBASIC21.25■□□□□ 0.99
Kcnu1O54982 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Mir6236-201ENSMUST00000184437 123 ntBASIC21.25■□□□□ 0.99
Kcnu1O54982 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.25■□□□□ 0.99
Kcnu1O54982 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.25■□□□□ 0.99
Kcnu1O54982 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kcnu1O54982 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Kcnu1O54982 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Kcnu1O54982 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
Kcnu1O54982 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kcnu1O54982 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.23■□□□□ 0.99
Kcnu1O54982 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.23■□□□□ 0.99
Kcnu1O54982 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.23■□□□□ 0.99
Kcnu1O54982 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kcnu1O54982 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kcnu1O54982 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.22■□□□□ 0.99
Kcnu1O54982 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.22■□□□□ 0.99
Kcnu1O54982 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Kcnu1O54982 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kcnu1O54982 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kcnu1O54982 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.21■□□□□ 0.99
Kcnu1O54982 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.21■□□□□ 0.99
Kcnu1O54982 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.21■□□□□ 0.99
Kcnu1O54982 Rps24-207ENSMUST00000224568 714 ntBASIC21.21■□□□□ 0.99
Kcnu1O54982 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.21■□□□□ 0.99
Kcnu1O54982 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Kcnu1O54982 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnu1O54982 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Kcnu1O54982 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnu1O54982 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kcnu1O54982 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.99
Kcnu1O54982 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcnu1O54982 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcnu1O54982 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kcnu1O54982 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.19■□□□□ 0.98
Kcnu1O54982 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kcnu1O54982 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Kcnu1O54982 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Kcnu1O54982 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms