Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
ChkaO54804 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.13■□□□□ 0.81
ChkaO54804 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
ChkaO54804 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.13■□□□□ 0.81
ChkaO54804 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ChkaO54804 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.12■□□□□ 0.81
ChkaO54804 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.12■□□□□ 0.81
ChkaO54804 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ChkaO54804 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Gm9870-201ENSMUST00000063874 645 ntBASIC20.12■□□□□ 0.81
ChkaO54804 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ChkaO54804 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.12■□□□□ 0.81
ChkaO54804 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ChkaO54804 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
ChkaO54804 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ChkaO54804 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
ChkaO54804 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.11■□□□□ 0.81
ChkaO54804 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ChkaO54804 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ChkaO54804 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ChkaO54804 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.1■□□□□ 0.81
ChkaO54804 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.1■□□□□ 0.81
ChkaO54804 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.1■□□□□ 0.81
ChkaO54804 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.1■□□□□ 0.81
ChkaO54804 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ChkaO54804 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ChkaO54804 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ChkaO54804 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.09■□□□□ 0.81
ChkaO54804 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ChkaO54804 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.08■□□□□ 0.81
ChkaO54804 Gm7417-201ENSMUST00000192950 473 ntBASIC20.08■□□□□ 0.81
ChkaO54804 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.08■□□□□ 0.81
ChkaO54804 Gm43530-201ENSMUST00000195920 274 ntBASIC20.08■□□□□ 0.81
ChkaO54804 Gm9959-201ENSMUST00000068277 390 ntBASIC20.08■□□□□ 0.81
ChkaO54804 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
ChkaO54804 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ChkaO54804 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
ChkaO54804 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ChkaO54804 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ChkaO54804 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ChkaO54804 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.06■□□□□ 0.8
ChkaO54804 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ChkaO54804 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ChkaO54804 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ChkaO54804 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ChkaO54804 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ChkaO54804 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.05■□□□□ 0.8
ChkaO54804 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
ChkaO54804 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Mir6236-201ENSMUST00000184437 123 ntBASIC20.05■□□□□ 0.8
ChkaO54804 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ChkaO54804 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ChkaO54804 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ChkaO54804 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.05■□□□□ 0.8
ChkaO54804 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ChkaO54804 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ChkaO54804 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ChkaO54804 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms