Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sptlc1O35704 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sptlc1O35704 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sptlc1O35704 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sptlc1O35704 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Sptlc1O35704 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.85■■□□□ 1.09
Sptlc1O35704 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Sptlc1O35704 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Sptlc1O35704 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Sptlc1O35704 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sptlc1O35704 Gm18671-201ENSMUST00000214826 683 ntBASIC21.84■■□□□ 1.09
Sptlc1O35704 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Sptlc1O35704 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Sptlc1O35704 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sptlc1O35704 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sptlc1O35704 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sptlc1O35704 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Sptlc1O35704 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC21.83■■□□□ 1.09
Sptlc1O35704 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.83■■□□□ 1.09
Sptlc1O35704 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sptlc1O35704 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.83■■□□□ 1.08
Sptlc1O35704 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sptlc1O35704 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sptlc1O35704 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sptlc1O35704 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.82■■□□□ 1.08
Sptlc1O35704 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.82■■□□□ 1.08
Sptlc1O35704 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.82■■□□□ 1.08
Sptlc1O35704 AV356131-201ENSMUST00000206201 750 ntBASIC21.82■■□□□ 1.08
Sptlc1O35704 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Sptlc1O35704 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sptlc1O35704 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Sptlc1O35704 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sptlc1O35704 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sptlc1O35704 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sptlc1O35704 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
Sptlc1O35704 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sptlc1O35704 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Sptlc1O35704 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sptlc1O35704 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sptlc1O35704 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Sptlc1O35704 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sptlc1O35704 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sptlc1O35704 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sptlc1O35704 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sptlc1O35704 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.8■■□□□ 1.08
Sptlc1O35704 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
Sptlc1O35704 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sptlc1O35704 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Sptlc1O35704 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Sptlc1O35704 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sptlc1O35704 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.79■■□□□ 1.08
Sptlc1O35704 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.79■■□□□ 1.08
Sptlc1O35704 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Sptlc1O35704 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.79■■□□□ 1.08
Sptlc1O35704 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.79■■□□□ 1.08
Sptlc1O35704 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC21.79■■□□□ 1.08
Sptlc1O35704 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Sptlc1O35704 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sptlc1O35704 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC21.78■■□□□ 1.08
Sptlc1O35704 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Sptlc1O35704 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sptlc1O35704 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sptlc1O35704 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sptlc1O35704 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sptlc1O35704 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Sptlc1O35704 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sptlc1O35704 Gm42778-201ENSMUST00000199644 553 ntBASIC21.77■■□□□ 1.08
Sptlc1O35704 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Sptlc1O35704 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sptlc1O35704 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC21.76■■□□□ 1.07
Sptlc1O35704 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Sptlc1O35704 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sptlc1O35704 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sptlc1O35704 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sptlc1O35704 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.75■■□□□ 1.07
Sptlc1O35704 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sptlc1O35704 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sptlc1O35704 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sptlc1O35704 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms