Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.04■□□□□ 0.48
Matn3O35701 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.04■□□□□ 0.48
Matn3O35701 Gm27502-201ENSMUST00000183495 199 ntBASIC18.04■□□□□ 0.48
Matn3O35701 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Matn3O35701 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Matn3O35701 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Matn3O35701 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Matn3O35701 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.03■□□□□ 0.48
Matn3O35701 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Matn3O35701 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.02■□□□□ 0.48
Matn3O35701 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Matn3O35701 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.02■□□□□ 0.48
Matn3O35701 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Matn3O35701 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Matn3O35701 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Matn3O35701 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 Gm14523-201ENSMUST00000117260 558 ntBASIC18.01■□□□□ 0.47
Matn3O35701 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Matn3O35701 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Matn3O35701 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18■□□□□ 0.47
Matn3O35701 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Matn3O35701 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Fam105a-203ENSMUST00000226170 3043 ntBASIC18■□□□□ 0.47
Matn3O35701 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Matn3O35701 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Matn3O35701 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.99■□□□□ 0.47
Matn3O35701 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Matn3O35701 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Matn3O35701 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Matn3O35701 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Matn3O35701 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Matn3O35701 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.97■□□□□ 0.47
Matn3O35701 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Matn3O35701 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Matn3O35701 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.97■□□□□ 0.47
Matn3O35701 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.97■□□□□ 0.47
Matn3O35701 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Matn3O35701 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Matn3O35701 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Matn3O35701 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms