Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.85■□□□□ 0.93
Clcn6O35454 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.85■□□□□ 0.93
Clcn6O35454 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Clcn6O35454 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn6O35454 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn6O35454 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn6O35454 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn6O35454 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
Clcn6O35454 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Clcn6O35454 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn6O35454 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.83■□□□□ 0.93
Clcn6O35454 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.83■□□□□ 0.93
Clcn6O35454 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Clcn6O35454 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Clcn6O35454 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Clcn6O35454 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.83■□□□□ 0.92
Clcn6O35454 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clcn6O35454 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn6O35454 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn6O35454 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clcn6O35454 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.81■□□□□ 0.92
Clcn6O35454 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clcn6O35454 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.81■□□□□ 0.92
Clcn6O35454 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clcn6O35454 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Clcn6O35454 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.8■□□□□ 0.92
Clcn6O35454 Gm43974-201ENSMUST00000205080 684 ntBASIC20.8■□□□□ 0.92
Clcn6O35454 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.8■□□□□ 0.92
Clcn6O35454 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.8■□□□□ 0.92
Clcn6O35454 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clcn6O35454 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn6O35454 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn6O35454 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC20.79■□□□□ 0.92
Clcn6O35454 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.79■□□□□ 0.92
Clcn6O35454 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.79■□□□□ 0.92
Clcn6O35454 Gm10232-201ENSMUST00000089221 720 ntBASIC20.79■□□□□ 0.92
Clcn6O35454 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn6O35454 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn6O35454 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clcn6O35454 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clcn6O35454 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
Clcn6O35454 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Clcn6O35454 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.78■□□□□ 0.92
Clcn6O35454 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.78■□□□□ 0.92
Clcn6O35454 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clcn6O35454 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Clcn6O35454 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.77■□□□□ 0.92
Clcn6O35454 Rps24-207ENSMUST00000224568 714 ntBASIC20.77■□□□□ 0.92
Clcn6O35454 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn6O35454 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clcn6O35454 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn6O35454 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn6O35454 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Clcn6O35454 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.76■□□□□ 0.91
Clcn6O35454 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clcn6O35454 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Clcn6O35454 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms