Protein–RNA interactions for Protein: O35426

Xbp1, X-box-binding protein 1, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xbp1O35426 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xbp1O35426 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Xbp1O35426 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Xbp1O35426 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.57■□□□□ 0.88
Xbp1O35426 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.57■□□□□ 0.88
Xbp1O35426 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Xbp1O35426 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.57■□□□□ 0.88
Xbp1O35426 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xbp1O35426 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xbp1O35426 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.56■□□□□ 0.88
Xbp1O35426 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Xbp1O35426 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Xbp1O35426 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Xbp1O35426 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.56■□□□□ 0.88
Xbp1O35426 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Xbp1O35426 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xbp1O35426 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Xbp1O35426 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xbp1O35426 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Xbp1O35426 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Xbp1O35426 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
Xbp1O35426 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Xbp1O35426 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Xbp1O35426 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Xbp1O35426 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xbp1O35426 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Xbp1O35426 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Xbp1O35426 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
Xbp1O35426 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xbp1O35426 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xbp1O35426 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Xbp1O35426 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Xbp1O35426 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Xbp1O35426 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Xbp1O35426 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Xbp1O35426 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Xbp1O35426 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xbp1O35426 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xbp1O35426 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xbp1O35426 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Xbp1O35426 Mir6236-201ENSMUST00000184437 123 ntBASIC20.51■□□□□ 0.87
Xbp1O35426 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Xbp1O35426 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Gm40881-201ENSMUST00000223397 166 ntBASIC20.5■□□□□ 0.87
Xbp1O35426 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Xbp1O35426 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.5■□□□□ 0.87
Xbp1O35426 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xbp1O35426 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Xbp1O35426 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xbp1O35426 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xbp1O35426 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Xbp1O35426 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Xbp1O35426 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.48■□□□□ 0.87
Xbp1O35426 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Xbp1O35426 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.48■□□□□ 0.87
Xbp1O35426 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xbp1O35426 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xbp1O35426 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Xbp1O35426 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.47■□□□□ 0.87
Xbp1O35426 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xbp1O35426 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xbp1O35426 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Xbp1O35426 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Xbp1O35426 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms