Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.33■□□□□ 0.52
Capn1O35350 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Capn1O35350 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Capn1O35350 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.32■□□□□ 0.52
Capn1O35350 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Capn1O35350 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Gm43173-201ENSMUST00000202246 593 ntBASIC18.32■□□□□ 0.52
Capn1O35350 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Capn1O35350 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Capn1O35350 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.32■□□□□ 0.52
Capn1O35350 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Capn1O35350 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 Gm12251-201ENSMUST00000117893 792 ntBASIC18.31■□□□□ 0.52
Capn1O35350 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.31■□□□□ 0.52
Capn1O35350 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Capn1O35350 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.3■□□□□ 0.52
Capn1O35350 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Capn1O35350 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Capn1O35350 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Capn1O35350 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.29■□□□□ 0.52
Capn1O35350 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.29■□□□□ 0.52
Capn1O35350 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
Capn1O35350 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.29■□□□□ 0.52
Capn1O35350 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Capn1O35350 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
Capn1O35350 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Capn1O35350 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.28■□□□□ 0.52
Capn1O35350 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Capn1O35350 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.28■□□□□ 0.52
Capn1O35350 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Capn1O35350 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
Capn1O35350 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Capn1O35350 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Capn1O35350 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Capn1O35350 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Capn1O35350 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Capn1O35350 Slc35b2-207ENSMUST00000226086 850 ntBASIC18.27■□□□□ 0.52
Capn1O35350 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Capn1O35350 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Capn1O35350 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.26■□□□□ 0.51
Capn1O35350 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Capn1O35350 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Capn1O35350 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Capn1O35350 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.25■□□□□ 0.51
Capn1O35350 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.25■□□□□ 0.51
Capn1O35350 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
Capn1O35350 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Capn1O35350 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms