Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
AlyrefO08583 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
AlyrefO08583 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
AlyrefO08583 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Gm13234-201ENSMUST00000120010 747 ntBASIC20.14■□□□□ 0.81
AlyrefO08583 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.14■□□□□ 0.81
AlyrefO08583 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
AlyrefO08583 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
AlyrefO08583 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AlyrefO08583 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.13■□□□□ 0.81
AlyrefO08583 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AlyrefO08583 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
AlyrefO08583 Gm20049-201ENSMUST00000219950 730 ntBASIC20.13■□□□□ 0.81
AlyrefO08583 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
AlyrefO08583 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AlyrefO08583 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AlyrefO08583 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AlyrefO08583 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AlyrefO08583 Gm37856-201ENSMUST00000191634 999 ntBASIC20.12■□□□□ 0.81
AlyrefO08583 Gm5408-201ENSMUST00000197998 747 ntBASIC20.12■□□□□ 0.81
AlyrefO08583 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.12■□□□□ 0.81
AlyrefO08583 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
AlyrefO08583 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AlyrefO08583 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AlyrefO08583 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
AlyrefO08583 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.11■□□□□ 0.81
AlyrefO08583 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
AlyrefO08583 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.11■□□□□ 0.81
AlyrefO08583 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
AlyrefO08583 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AlyrefO08583 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
AlyrefO08583 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.1■□□□□ 0.81
AlyrefO08583 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.1■□□□□ 0.81
AlyrefO08583 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
AlyrefO08583 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.1■□□□□ 0.81
AlyrefO08583 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AlyrefO08583 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
AlyrefO08583 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AlyrefO08583 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
AlyrefO08583 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AlyrefO08583 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AlyrefO08583 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
AlyrefO08583 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AlyrefO08583 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.08■□□□□ 0.81
AlyrefO08583 Gm10819-201ENSMUST00000099988 561 ntBASIC20.08■□□□□ 0.81
AlyrefO08583 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.08■□□□□ 0.8
AlyrefO08583 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AlyrefO08583 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AlyrefO08583 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
AlyrefO08583 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
AlyrefO08583 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
AlyrefO08583 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AlyrefO08583 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AlyrefO08583 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
AlyrefO08583 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
AlyrefO08583 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
AlyrefO08583 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.07■□□□□ 0.8
AlyrefO08583 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
AlyrefO08583 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
AlyrefO08583 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
AlyrefO08583 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
AlyrefO08583 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AlyrefO08583 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AlyrefO08583 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
AlyrefO08583 Gm11421-201ENSMUST00000122124 294 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms