Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rundc3aO08576 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3aO08576 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rundc3aO08576 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.39■□□□□ 0.69
Rundc3aO08576 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3aO08576 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Rundc3aO08576 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3aO08576 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rundc3aO08576 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Rundc3aO08576 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.38■□□□□ 0.69
Rundc3aO08576 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rundc3aO08576 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rundc3aO08576 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Rundc3aO08576 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Rundc3aO08576 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.37■□□□□ 0.69
Rundc3aO08576 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.37■□□□□ 0.69
Rundc3aO08576 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.37■□□□□ 0.69
Rundc3aO08576 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rundc3aO08576 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
Rundc3aO08576 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.36■□□□□ 0.69
Rundc3aO08576 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rundc3aO08576 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.35■□□□□ 0.69
Rundc3aO08576 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.35■□□□□ 0.69
Rundc3aO08576 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rundc3aO08576 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3aO08576 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3aO08576 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.34■□□□□ 0.69
Rundc3aO08576 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3aO08576 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3aO08576 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rundc3aO08576 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3aO08576 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3aO08576 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3aO08576 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3aO08576 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rundc3aO08576 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.33■□□□□ 0.68
Rundc3aO08576 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.33■□□□□ 0.68
Rundc3aO08576 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Rundc3aO08576 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rundc3aO08576 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rundc3aO08576 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.33■□□□□ 0.68
Rundc3aO08576 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.32■□□□□ 0.68
Rundc3aO08576 Mir6236-201ENSMUST00000184437 123 ntBASIC19.32■□□□□ 0.68
Rundc3aO08576 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.32■□□□□ 0.68
Rundc3aO08576 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rundc3aO08576 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3aO08576 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.31■□□□□ 0.68
Rundc3aO08576 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Rundc3aO08576 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3aO08576 Gm9870-201ENSMUST00000063874 645 ntBASIC19.31■□□□□ 0.68
Rundc3aO08576 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rundc3aO08576 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rundc3aO08576 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rundc3aO08576 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Rundc3aO08576 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rundc3aO08576 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rundc3aO08576 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.3■□□□□ 0.68
Rundc3aO08576 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms